Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876940.1_cds_XP_016436313.1_32186
CDS Infomation

[gene=LOC107762463] [db_xref=GeneID:107762463] [protein=protein phosphatase 2C 29-like] [protein_id=XP_016436313.1] [location=complement(join(5669..5793,7146..7410,7802..7915,10332..12137))] [gbkey=CDS]
Sequence

ATGGAAAGAGAGAGGGCTTTCTTCATGTCCGGTCCGATCGAGCGAGGAGCTCTATCCGGT
CCACTAGATTCCGCCGTTCCATTCTCAGCTCCGTTGGGTGGTGATGGCATTTATGTAAAA
AAGAGAAAGTTGAAGGGCATTAATGGAATTAAAAAAGCCTTTAGACGGCCGTGGGTGGTG
CCAGTGAGAAACTACTTCACAGGTAAAAAGGAAATTAACTGTACACGTGATTATAATGGA
TGGCATTTGCGTAATAATGTGAATGTTGAATGGGCATTAGGAAAAGCAGGGGAGGATCGT
GTACATGTGGTTGTATGTGAAGAACATGGATGGCTGTTTGTTGGGATTTATGATGGGTTT
AATGGACCTGATGCACCTGAATTCTTGATGAGTAATCTGTACAAAGCAATGAACAAAGAA
TTAGAGGGTTTGTTTTGGGATAGTGAAGATACTAGTATTAGTAATAATAACCAAGAAAGC
AAAAAAAATGCAAATATAGAAAATGAAGTGATCATTGAGGACTCGAATGAAGCTAATTCG
AATCGAGTGAATAAGGAGATGAGTAGCGGGGGTAGGGGAGTAGAAGAAGCTGAGAATGAG
GTTAATTTGGATCAGATGGATAAAAGGTGTGAAAAGAAGGTGATATTTCAATCAGAAAAT
GCAAATATAGAAAATGAAGTGATTGGTGAGGAGTCGAACAAGCCACATTGGAATCGAGGA
CCTAAGGCCATAAGTAGGGGGGCTAGGGGAGTAGAAGAGGGTGAAAATGAGGTTAATTTG
GAGCAGCTAGATAAAGGATCGGAAAATGAAGTGATCATTGAGGTCTCAAACAAACCAAAT
TCAAATCGAGCAGCTAAGTCGACGAGTAGGGGAGAAAGGGGAGTAGAAGAAGGTGAAAAT
GAGGTTAATTTGGAGCAGCTAGATAAAGGGTCGGAAAATGAAGCGATTGGTGAGGACTCG
AACAAGCCAGATTCGAATCGAGCACCTGATGCCACGAGTAGGGGAGATAAGGGAGTAGAA
GAAGGTGAAAATGAGGTTAATTTGGAACAGATGGATAGAGGGTCTGAAAAGAGAGTGACA
TTTCAATCAGGGGAGATAGAGGTTAGGAGGAGGAGATTGTGGGAATTTTTAGCAGAAGAT
GAGACAGAGGATGGTCTTGATCTTTCAGGTTCGGAGAGATTTGCATTTTCGGTAGATGAT
GCATTAAGTGTAAATAGTGCAGGTTCAGCGGTTAATAGGAGGTCGTTACTGTTGTCGAAG
TTGAAACATGGTTTGTCAATTAATAAGCACAAAGAGAGTAACAGGTTATTCCCATGGAGA
TTCGGATTGCAAGCTAAAAAGAAGGTTGAAGTAGGGGAGAATAGAGTGGAGGAAAGGATT
GATAGAAGTGAAAGGAAGCGTAAGGTGGGTCCGGTTGATCATGAGTTGGTTTTGAGAGCA
ATGTCAAGAGCTCTCGAAATCACTGAGCTCGCATACTTGGATATGACAGATAAAGTTCTT
GATCGGTACCCTGAGCTTGCATTAATGGGTTCTTGTTTGTTGGTTGCTTTGATGAGAGAT
GAAGATGTGTATGTAATGAATGTGGGAGATAGTCGTGCTATTGTGGCTCAGTACGAGTCT
GAGGTGGTTAGTTCTAGTTCAGAATCAGTAGTTCCAGGCAATTGCGAGTTGGCCGTTGAG
GGCATTGCTGAAGAACCTGTAGTTCCCGGTGATGAGGAAAATAAGGCGACGAATGAGATA
CCTATTCAAGCTATGAAGCTGACTGCCTTGCAATTGTCAACTGATCACAGCACTAGCATT
GAAGAAGAAGTTATTAGAATCAAGAATGAACACCCAGATGACTGCAATTGCATTGTTAAT
GATAGAGTGAAAGGTCGTTTAAAGGTCACTCGCGCTTTTGGGGCGGGCTTCCTGAAAAAG
CCTAAATTGAATGATGCATTGCTAGAAATGTTTCGGAACGAGTACATTGGGGATGCTCCT
TATTTATCTTGTAAACCTTCACTGCGCCATCATAGACTCTGTCCTAAGGATCAGTTTTTG
GTGCTATCCTCTGATGGCTTGTACCAATATTTGAGCAATCAAGAGGTGGTTTGTCATGTG
GAGAACTTCATGGAGAAATTCCCTGATGGGGATCCTGCTCAGCATCTTATTGAGGAGCTC
TTATTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAATTGTTGGACATCCCCCAG
GGAGATCGTAGGAAGTACCATGATGATGTTACTGTTATGGTGGTATCTCTTGAGGGAAGA
ATTTGGAAGTCGTCTGGGAAATACCTCTGA

Peptide Sequence

PEP ID

XP_016436313.1
PEP Infomation

PREDICTED: protein phosphatase 2C 29-like [Nicotiana tabacum]
Sequence

MERERAFFMSGPIERGALSGPLDSAVPFSAPLGGDGIYVKKRKLKGINGIKKAFRRPWVV
PVRNYFTGKKEINCTRDYNGWHLRNNVNVEWALGKAGEDRVHVVVCEEHGWLFVGIYDGF
NGPDAPEFLMSNLYKAMNKELEGLFWDSEDTSISNNNQESKKNANIENEVIIEDSNEANS
NRVNKEMSSGGRGVEEAENEVNLDQMDKRCEKKVIFQSENANIENEVIGEESNKPHWNRG
PKAISRGARGVEEGENEVNLEQLDKGSENEVIIEVSNKPNSNRAAKSTSRGERGVEEGEN
EVNLEQLDKGSENEAIGEDSNKPDSNRAPDATSRGDKGVEEGENEVNLEQMDRGSEKRVT
FQSGEIEVRRRRLWEFLAEDETEDGLDLSGSERFAFSVDDALSVNSAGSAVNRRSLLLSK
LKHGLSINKHKESNRLFPWRFGLQAKKKVEVGENRVEERIDRSERKRKVGPVDHELVLRA
MSRALEITELAYLDMTDKVLDRYPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAQYES
EVVSSSSESVVPGNCELAVEGIAEEPVVPGDEENKATNEIPIQAMKLTALQLSTDHSTSI
EEEVIRIKNEHPDDCNCIVNDRVKGRLKVTRAFGAGFLKKPKLNDALLEMFRNEYIGDAP
YLSCKPSLRHHRLCPKDQFLVLSSDGLYQYLSNQEVVCHVENFMEKFPDGDPAQHLIEEL
LFRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYL

Transcript Sequence

Gene sequence data has not been registered.